Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKRILMLEDGNYFIGDAIGSEKETIGEVVFNTGMTGYQETITDPSYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFASNWRNQITLNEFLKEKGIPGIAGIDTRKLTKLIRKEGTLKGILAAETADKEELLHHLRSVRLPVDQVHEVSSAKAFASPGDGKRVVLVDYGVKS--SILRELNKRNCYVTVVPYNTSAEEILAMHPDGVMLSNGPGDPKDVPEALEMIRGIQ-GKLPLFGICLGHQLFALANGADTFKLKFGHRGANHPVKELA---------T------GRVDFTAQNHGYAVEKDSLIGTDLKVTHIELNDETVEGLAHKEYPAYTVQYHPEANPGPSDVNYLFDEFMEMMNGKEEGELHA |
1GPM Chain:A ((6-227)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEEN-SPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGY-AQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVT--AIPS-DFITVASTE-SCPFAIMANEEKRFYGVQFHPEVTHTR-QGMRMLERFVRDICQCE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59286 for 1547 contacts (-38.3/contact) +
2D Compatibility (PS) -19891 + (NN) -9433 + (LL) 11076
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -88134.0 ( -56.97 by residue)
QMean score : 0.460
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