Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYE--QFAIPLA-VMTNHEAEFIAIKLGLEEALKKQATLIRLYSDSKVAIEAIHKRHA-KNPLFKPHLDAILEMADSLELFFAEWRNVSQNKQADQLARQAIKKQKQPGVK
3HST Chain:B ((4-137))
VVIEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADRLANDAMDAAAQS---
General information:
TITO was launched using:
RESULT:
Template:
3HST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61844 for 1107 contacts (-55.9/contact) +
2D Compatibility (PS) -14444 + (NN) -9503 + (LL) 84
1D Compatibility (HY) -400 + (ID) 1900
Total energy: -88007.0 ( -79.50 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3HST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HST-query.scw
PDB file :
Tito_Scwrl_3HST.pdb
: