Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQV-ESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
3ND7 Chain:E ((3-158))---KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI------LFTPEEKKYLIEEATKEMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQK--


General information:
TITO was launched using:
RESULT:

Template: 3ND7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107117 for 1093 contacts (-98.0/contact) +
2D Compatibility (PS) -15859 + (NN) -3380 + (LL) 8
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -146148.0 ( -133.71 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_3ND7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ND7-query.scw
PDB file : Tito_Scwrl_3ND7.pdb: