Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQ-ELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLEALNEVENR----FNKLAIADYLLPTY---SYISVVEL----------SNYLASHMAGGDDPY-QNKGVRARLYPALPPKK-HICFYPMSKKRDGADNWYML---PMEERQQLIRDHGLIGRSYAGKVQQ-IIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASA-RYAEFGSFFIGNLLLSE----QLSKLFTI----------------- |
| 3G8Q Chain:A ((1-278)) | ---MKVSLAG-------QTVDVKKILNEIPKRTVTAALLEGGEIVAVEE--ADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVF------RIRRFLISGEFDRDELRERILEDIEPRI-LDPFAVRARIARAGAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54753 for 1659 contacts (-33.0/contact) +
2D Compatibility (PS) -24302 + (NN) -368 + (LL) 1176
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -88697.0 ( -53.46 by residue)
QMean score : 0.172
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