Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKETGAEEKYKEVQEAYETLSDTQKRAAYDQYGAAGANGGFGGFDGGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTCSGSGAKPGTSPVTCQKCHGSGVINVDTQTPLGTMRRQVTCDVCQGSGQEIKEKCPTCHGTGHEKKTHKVSVKIPAGVETGQQIRLTGQGEAGFNGGPYGDLFVIINVLPSQQFERNGSTIYYTLKISFVQAALGDTIDIPTVHGA-VEMSIPAGTQTGKTFRLRGKGAPKLRG-GGQGDQHVTVNIVTPTKLNDAQKEALHAFAEASGDKMVHPKKKGFFDKVKDALDVD |
3AGX Chain:A ((165-339)) | -------------------------------------------------------------------------------------------------------------------------THDLRVSLEEIYSGCTKKMKISHKRLNPD-----------------------------------------------------------GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLPI------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43176 for 1092 contacts (-39.5/contact) +
2D Compatibility (PS) -18746 + (NN) -6989 + (LL) 5396
1D Compatibility (HY) -10800 + (ID) 1650
Total energy: -75965.0 ( -69.57 by residue)
QMean score : 0.520
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