Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSKENMKAYGWLFHKLGYNVLMPDNIAHGESHGQL-IGYGWNDRENIIKWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWDELKF-------QAK-----EMYG-LPAF--P---------LLYEVSTIS--KIR------AGF-SYGQASSVEQLKKNNLPALFIHGDKDNFVPTSMVYDNYKATAGKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK |
| 3V48 Chain:A ((13-261)) | -------------------------------------------------------------------------------------ADAPVVVLISGLGGSGSYWLPQLAVL-EQEYQVVCYDQRGTGNNPDTLAEDYSI---AQMAAELHQALVAAGIEHYAVVGHALGALVGMQLAL-DYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALP-DSQKMVMPYGGHACN-VTDPETFNALLLNGLASLLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69248 for 1803 contacts (-38.4/contact) +
2D Compatibility (PS) -22368 + (NN) -8332 + (LL) 7588
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -101660.0 ( -56.38 by residue)
QMean score : 0.414
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