Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQFAVDFIEASREEASAILEFLNTVTEETDFILHTVSNQLSLSEMETFIENTLMTKNCICLIAKLKNKVIGLITIISQSDIEIEHVGDLFIAVQKDYWGYGIGHILMEEAIEWASDNDITRRLELSVQGRNERAIHLYQKFGFEIDGLQTRGIKRENGEFLDIYRMSKLID
3FBU Chain:A ((3-166))
-IKAERLLIRKFEFKDWEAVHEYTSDSDVM-KYIP--EGV-FTEEDTRNFVNKNMG-AKNFPVILIGENILVGHIVFHKYF---GEHTYEIGWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYFKKCIP-HGNEWWDEYYYAILEE
General information:
TITO was launched using:
RESULT:
Template:
3FBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114643 for 1212 contacts (-94.6/contact) +
2D Compatibility (PS) -17337 + (NN) -2483 + (LL) 860
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -139603.0 ( -115.18 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3FBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBU-query.scw
PDB file :
Tito_Scwrl_3FBU.pdb
: