Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTIEKIDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFVAAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLLGLDKSQEILDDTLKKAQAIFQNLEKKANFNARKIID-IIEGLRLNG |
3WJO Chain:A ((52-293)) | -------------------------------YIVSGGGKRIRPMIAVLAARAVGYE-GNAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLG-----SLKVLEVMSEAVNV--IAEGEVLQLMN--------NYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA--------VGDDLNEGKPTLPLLHAMHHG------TPEQAQMIRTAIEQG---NGRHLLEPVLEAMNACG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60446 for 1730 contacts (-34.9/contact) +
2D Compatibility (PS) -24055 + (NN) -11854 + (LL) 5324
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -110831.0 ( -64.06 by residue)
QMean score : 0.307
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