Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVITVKNDIEGGKIAFTLLEEKMK-----AG-AQTLGLATGSSPITFYEEIVKS----NLDFSNMVSINLDEYVGIAASNDQSYSYFMHKHLFDAK--PFKENNLPNGLAKDLKEEIKRYDAVI-NANPIDFQILGIGRNGHIGFNEPGTPFDITTHVVDLAPSTIEANSRFFNSI-DDVPKQALSMGIGSIMKSKTIVLVAYGIEKAEAIASMIKGPITEDMPASILQKHDDVVIIVDEAAASKL
3HN6 Chain:A ((22-268))
MRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENHPESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYEL
General information:
TITO was launched using:
RESULT:
Template:
3HN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144551 for 1977 contacts (-73.1/contact) +
2D Compatibility (PS) -25228 + (NN) -12956 + (LL) 0
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -204935.0 ( -103.66 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3HN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HN6-query.scw
PDB file :
Tito_Scwrl_3HN6.pdb
: