Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
1UCN Chain:C ((5-135))
-ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPWFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCI-----QVGRNIIGGSDSVESAEKEIGLWFHP
General information:
TITO was launched using:
RESULT:
Template:
1UCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63025 for 992 contacts (-63.5/contact) +
2D Compatibility (PS) -13732 + (NN) -3408 + (LL) -36
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -97351.0 ( -98.14 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1UCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UCN-query.scw
PDB file :
Tito_Scwrl_1UCN.pdb
: