Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHSSWHDLIKRELPNHYYNKINTFMDAVYESGIVYPPRDKVFNAIQITPLENVKVVIIGQDPYHGPQQAQGLSFSVPDNLPAPPSLQNIL---KELAEDIGSRSHHDLTSWAQQGVLLLNACLTVPEHQANGHAGLIWEPFTDAVIKVVNQKETPVVFILWGGYARKKKSLIDNPIHHIIESPHPSPLSAYRGFFGSRPFSRTNHFLEEEGINEIDWLN
2C53 Chain:A ((31-242))
----AWRPLMEPELANPLTAHLLAEYNRRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQNPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIR-PDPRVHCVLKFSNPSPLSKV-PFGTCQHFLVANRYLETRSISPIDWSV
General information:
TITO was launched using:
RESULT:
Template:
2C53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114512 for 1637 contacts (-70.0/contact) +
2D Compatibility (PS) -22379 + (NN) -12793 + (LL) 564
1D Compatibility (HY) -18400 + (ID) 3950
Total energy: -171470.0 ( -104.75 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2C53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C53-query.scw
PDB file :
Tito_Scwrl_2C53.pdb
: