Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQEFEK-IGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNR---------------------------------------------------------------------------------DQSDFILGPTHEETFTTLVRDAVK-SYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDL--------DVT---------------------------------YEDYRKAYEAIFTRAGLD---FKGIIGDGGAM--GGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENG-RSNPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKKASE---GIVEVKIKASGDTIEVHADNLIETLEILTKK |
2ZT5 Chain:A ((89-657)) | ----------------------------------GVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRFRQHMENEMAHYACDCWDAESKTSYG-----WIEIVGCADRSCYDLSCHARATKVPLVAEKP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YVEEVVPNVI-EPSFGLGRIMYTVFEHTFHVREG---D---EQRTFFSFPAVVAPFKCSVLPLSQNQ-EFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79647 for 2754 contacts (-28.9/contact) +
2D Compatibility (PS) -38375 + (NN) -7858 + (LL) 15728
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -123952.0 ( -45.01 by residue)
QMean score : 0.348
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