Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYTPDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAE-RNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNFSMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKN-GEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF |
3A3J Chain:A ((3-344)) | ---------------------------------TPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGR-NFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGLKNTNFTTPHGLDDP--NQ------------YSSARDMAIIGAHIIRDLPEEYKIYSEKDFTFNK-----IKQPNRNGLLWD---KTI--NVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPT--YKGREVESKKLLQWGFANFETFKTLEAGKE---ISEQRVYYGDKNSVKLGAFMDHFITIPKGKQS-EVKARYELADKNLQAPLAKGQVIGKVVYALDG-----KDI----ASANLQVMNDVGE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A3J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109349 for 2898 contacts (-37.7/contact) +
2D Compatibility (PS) -36546 + (NN) -8074 + (LL) 6640
1D Compatibility (HY) -17600 + (ID) 5150
Total energy: -170079.0 ( -58.69 by residue)
QMean score : 0.586
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