Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGTLV-APP-----------------------LTNLRSIT-ESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRP-QDREAYNQFLREARDLFHRE--------GLEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGG-PPQAVSP-----------IGPVRDVIEYAL-TEMPANKIVMGQNLYGYDWTLPYTAGG---------TPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR |
| 3G6M Chain:A ((19-382)) | ------------------------------------------------------------------------------------------------TGSINAVYFTNWGIYG-RN-FQPADLQASKILHVLYSFMNLRVDGTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTW----STNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYPASETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPS------HYNVLKLAQLGSVLDNINLMAYDYAGSWDSVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGTDGPGKPYSTIGEGSWESGIWDYKVLPK----AGATVITDSAAGATYS-YDS--SSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTGSDSLIGTALSSMG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144358 for 2694 contacts (-53.6/contact) +
2D Compatibility (PS) -32733 + (NN) -9417 + (LL) 8512
1D Compatibility (HY) -9200 + (ID) 2650
Total energy: -189846.0 ( -70.47 by residue)
QMean score : 0.455
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