Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --M-RLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAK-ASSDVKPGDELTVRFGQK-------LV-TVQVNELKDTTKKEEAANMYTILKEEKLGE----------------------------------------------------------------------------------------------------------------------------------------- |
| 1KSK Chain:A ((1-234)) | GSHMRLDKFIAQQLGVSRAIAGREIR-GNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1337 for 471 contacts (-2.8/contact) +
2D Compatibility (PS) -8686 + (NN) -706 + (LL) -76
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -15105.0 ( -32.07 by residue)
QMean score : 0.438
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