Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MSEHYYSEKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFG---------SRLLIDSFEE--PEVEGGILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQNGITNVKIYQSDLFSNVDSAQTFASILTNPPIRA------------------------GKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEELFDEVSVVQKKKGYYIIKAKKV |
| 1T43 Chain:A ((2-275)) | EYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQ-FAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41705 for 1539 contacts (-27.1/contact) +
2D Compatibility (PS) -21402 + (NN) -3454 + (LL) 52
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -76959.0 ( -50.01 by residue)
QMean score : 0.422
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