Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTL--------GITLAAAGQLITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAF------------------VLPGYGWFIAARIIMAMGAGVVVVTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLGRMIAV--------ALGWKSVFGAIALLGLIAMVVIFFTLPYTEGD----KPV-PL-----------------LQQLA----LF-KKRKVAMGLSIT----FFW-----LGGYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLSLV--TH-SYIGVLVILILWSFAAW-STGPTQQFHLATIEP-EMSGVLLSMNQSMMQFAMAVGAGIGGVFVE------NVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ |
| 4GC0 Chain:A ((16-469)) | --------VATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLL-YTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -380254 for 3237 contacts (-117.5/contact) +
2D Compatibility (PS) -38531 + (NN) -12510 + (LL) 1556
1D Compatibility (HY) -15600 + (ID) 2850
Total energy: -448189.0 ( -138.46 by residue)
QMean score : 0.314
|
|
|