Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKELIKEHQKDINPA----LQLHDWVEYYRPFAANGQSANYIPALGKVNDSQLGICVLEPDGTMIHAGDWNVSFTMQSISKVISFIAACMSRGIPYVLDRVDVEPTGDAFNSIIRLEINKPGKPFNPMINAGALTIASILPGE-SAYEKLEFLYSVMETLIGKR-PRIHEEVFRSEWETAHRNRALAYYLKETNFLE-A-EVEETLEVYLKQCAMESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGMLLKHMAQEWELSIF
4BQM Chain:A ((21-333))--------QSMIPDFEEFTGHVDRIFEDVK-EL----------------PDLWGVSLCTVDGQRHSVGHTKIPFCLQSCVKPLTYAISISTLGTDYVHKFVGKEPS------LS--LN-EEGIPHNPMVNAGAIVVSSLIKMDCNKAEKFDFVLQYLNKMAGNEYMGFSNATFQSEKETGDRNYAIGYYLKEKKCFPKGVDMMAALDLYFQLCSVEVTCESGSVMAATLANGGICPITGESVLSAEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSAVSGAILLVVPN----------VMGMMCLSPPLDKLGNSHRGTSFCQKLVSLFNFHNY


General information:
TITO was launched using:
RESULT:

Template: 4BQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1681 -230831 -137.32 -815.66
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -137.32
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_4BQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BQM-query.scw
PDB file : Tito_Scwrl_4BQM.pdb: