Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDYAKRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMTNNQYSFLSSSIVKEVARYNGSVSEFVPPEVELALQQKFRQG
3NBK Chain:A ((24-176))----AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL---


General information:
TITO was launched using:
RESULT:

Template: 3NBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 738 -109260 -148.05 -714.11
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -148.05
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_3NBK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NBK-query.scw
PDB file : Tito_Scwrl_3NBK.pdb: