Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKRAAVVEI-GDDRGRIDLVNPEILEKSGEQTGIE-GCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
4WXK Chain:B ((3-148))--ALNVLIYPDDHLKVVCEPVTEVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGE-TGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLS-------------


General information:
TITO was launched using:
RESULT:

Template: 4WXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 728 -78086 -107.26 -542.26
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -107.26
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_4WXK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WXK-query.scw
PDB file : Tito_Scwrl_4WXK.pdb: