Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQMNRYDQAATLRAKMEKRERVLPMVYSQKAKTLAVISGKGGVGKSNITLNMALALQDKGKKVLLIDLDIGMGNIDILIGNSSS--ATIIDVLTDRKPLLQSLSV--GPKGLRYISGGTGLDVMFQLDQRKWTFFANELSHAL--SQFDYVLFDMGAGLSKDQLPFILSAEDILIITTPEPTAIMDAYSAVKHLVLTENKLSMKVAVNRCRDQKEGLDAFARLSRTIHMFLDVQVQFAGSVSDDVIVSKAVVEQVPFFIKSPQAKASRSVRILADALFEREETRHKEDKQTFIEKLSSFLMRRA
4V03 Chain:A ((2-246))------------------------------AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLP---------VIDIEKWNKTVEE---IKNSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLLESMDK-RNYKVIVNRIKWEMVKRGAMLSVEDI-VDILK--AEIIGIIPEEPKLVDFTNRGEPIVL-DEKFPASQAIIDTARRLMGESIPL--------------------


General information:
TITO was launched using:
RESULT:

Template: 4V03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1285 -167680 -130.49 -735.44
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -130.49
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_4V03.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V03-query.scw
PDB file : Tito_Scwrl_4V03.pdb: