Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPKYKPLFEPFTFKSGVTINNRIAVAPMTHYASNEDGTISEAE--LDYIIPRSKEMG-MVITACANVTPDGKAFPGQPAIHDDSNIPGLKKLAQAIQAQGAKAVVQ-IHHGGIECPSELVPQ--QDVVGPSDVFDNGKQIARA---------LTEEEVENIVKAFGEATRRAIEAGFDGVEIHGANGYLIQQFYSPKTNQRTDRWGGSDEKRLAFPLAIVDEVKKAASEHAKGAFLVGYRLSPEEPETPGLTMTETYTLVDALGDKELDYLHISLMDVNSKARRGADPTRTRMDLLNERVGNKVPLIAVGSIHSADDALAVIENGIPLVAMGREILVDPNWTVKVKEGREKQIETVIKGTDKEKYHLPEPLWQAIVNTQGWVPYKD
4K8E Chain:A ((17-247))-------LFKPIKIGNNELLH-RAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLVVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIG-HEK----VGLRLSP-----------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4K8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1147 33709 29.39 156.06
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 29.39
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_4K8E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K8E-query.scw
PDB file : Tito_Scwrl_4K8E.pdb: