Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPETAKPAPLGKGTA
3GZL Chain:A ((25-70))
------------------IQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3GZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17147 for 231 contacts (-74.2/contact) +
2D Compatibility (PS) -5039 + (NN) -1864 + (LL) 2952
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -26198.0 ( -113.41 by residue)
QMean score : 0.751
(partial model without unconserved sides chains):
PDB file :
Tito_3GZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZL-query.scw
PDB file :
Tito_Scwrl_3GZL.pdb
: