Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQ-ADEVMSDSLLHLFNAGGKRFRPLFTVLSAQI-GPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLG------PEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPD-CARLRA-LLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVPGRRALAALVDYTVSRHG |
| 1WY0 Chain:A ((5-341)) | ---------------EELFARIKEKAKLIDEKIFELIPEKDPRVLYEAARHYPLAGGKRVRPFVVLTSTEAVGG--DPLRAIYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHRIWGVNMAILAGDLLFSKAFEAVARAEIPPEKKARVLEVIVKASNELCEGQARDLEFEKKSTVTIEEYMEMISGKTGALFEASAKVGGIIGTDNEEYIKALSSWGRNVGIAFQIWDDVLDLIADEKKLGKPVGSDIRKGKKTLIVAHFFENADEKDKQRFLKIFGK---DIKSDVMEAIDLLKKYGSIDYAAEIAKDMIKKANEALRILPKSKARMDLELLAKFIVERE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162913 for 2686 contacts (-60.7/contact) +
2D Compatibility (PS) -34085 + (NN) -19432 + (LL) 504
1D Compatibility (HY) -18000 + (ID) 4700
Total energy: -238626.0 ( -88.84 by residue)
QMean score : 0.603
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