Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRT--VGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR
4ONC Chain:A ((55-280))
------------------------------LPNHVAIVMDGNGRWATQRGLARTE-GHKMGEAVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSNDVITINYCVNYGGRTEITEATREI-AREVAAGRLNPERITEST---IARHLQRPDIPDVDLFLRTSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRR---
General information:
TITO was launched using:
RESULT:
Template:
4ONC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127587 for 1768 contacts (-72.2/contact) +
2D Compatibility (PS) -24297 + (NN) -7771 + (LL) 2792
1D Compatibility (HY) -14000 + (ID) 4100
Total energy: -174963.0 ( -98.96 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_4ONC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ONC-query.scw
PDB file :
Tito_Scwrl_4ONC.pdb
: