Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWV--RSFDRAPSLL--P---AH--PQLEVLQGDITDADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNI-----------AGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT--MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLF-TTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 1OC2 Chain:A ((3-329)) | ------------QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSL----NDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY--NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK-----GRMGETYLIGADGEKNNKEVLELILEKMGQPKDA--Y-DH--V-----------------TDRA-----GHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDWW--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176287 for 2645 contacts (-66.6/contact) +
2D Compatibility (PS) -32427 + (NN) -13451 + (LL) 4760
1D Compatibility (HY) -4400 + (ID) 3400
Total energy: -225205.0 ( -85.14 by residue)
QMean score : 0.459
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