Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAWQDHAEV-SVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCGVPYT--DALPEMPEPAIEVEPPVCD-CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
2H2F Chain:A ((19-227))
-----LTGAGISTPSGIPD-------------Q-NVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDV----PLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2H2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84017 for 1520 contacts (-55.3/contact) +
2D Compatibility (PS) -21030 + (NN) -8264 + (LL) 3488
1D Compatibility (HY) -19600 + (ID) 3700
Total energy: -133123.0 ( -87.58 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_2H2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H2F-query.scw
PDB file :
Tito_Scwrl_2H2F.pdb
: