Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRAPDTPEVVLRLRGVCKRYG----SITAVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAGSIEVLGLD----PITDNARLRARIGVMLQGGGGYPAARAGEMLDLVASY-----AANPLDPHWLLDTLGLTEAARTTYRRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDALRRD-GVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMRSGAKDQLRFTA--------PPRLDLSLLASALPEGYQATELTPGEYLVEGPVDPQVLA----TVTAWCAQIDV--------LATDMRVEQRSLEDVFLDLTGRKLRQ-- |
| 3TUZ Chain:H ((23-362)) | ---------HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177621 for 2276 contacts (-78.0/contact) +
2D Compatibility (PS) -32620 + (NN) -6899 + (LL) 172
1D Compatibility (HY) -16400 + (ID) 3450
Total energy: -236818.0 ( -104.05 by residue)
QMean score : 0.331
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