Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLDELADQLRQEHCVGVEV--LPLDLADT-QARAQLADRL-RSDAIAGLCNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALP--GMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWA-----------EIASAERFS-----IPLAQ-VSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR
3QRW Chain:B ((24-254))
------QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122678 for 1682 contacts (-72.9/contact) +
2D Compatibility (PS) -23151 + (NN) -15626 + (LL) 2808
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: -175647.0 ( -104.43 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3QRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QRW-query.scw
PDB file :
Tito_Scwrl_3QRW.pdb
: