Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELK---KDPVSRRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAE---RKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQ-ENDGLDRVKPFRP-FQLNSRLLALADSDAIVLHCLPAHRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
| 4A8T Chain:A ((23-331)) | MKRDYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKN-KSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPG-IQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGD-ATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDA-SSVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTSIRGLLVYLM--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194098 for 2602 contacts (-74.6/contact) +
2D Compatibility (PS) -33556 + (NN) -24869 + (LL) -120
1D Compatibility (HY) -24800 + (ID) 5650
Total energy: -283093.0 ( -108.80 by residue)
QMean score : 0.592
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