Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEILRGGRSRLVFGTLAILLCLVLGVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAVGATGPGVMITIDDPGPGVAPEVMIDVINELRAAGAEAI-QINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIGDPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK |
1C30 Chain:A ((365-460)) | -----------------------------------------------------------------------------------------------------------------EKFAGANDRLTTQMKSVGEVMAIGRTQQ---ESLQKALRGLE-----VGATGFDPKVSLDD------PEALTKIRRELKDAGADRIWYIADAFRA------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4983 for 437 contacts (11.4/contact) +
2D Compatibility (PS) -8367 + (NN) -3090 + (LL) 13320
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: 3346.0 ( 7.66 by residue)
QMean score : 0.144
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