Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS--GATLRRGAVAAVVAAG--TTSPVDLVLADPPYNVDSA---------DVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
2IGT Chain:A ((134-275))
---------------------FPEQIVHWEWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICRE--ILSPKALGLVLTAYS---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IGT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81480 for 1022 contacts (-79.7/contact) +
2D Compatibility (PS) -14168 + (NN) -8777 + (LL) 3332
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -107693.0 ( -105.37 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2IGT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IGT-query.scw
PDB file :
Tito_Scwrl_2IGT.pdb
: