Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIMYNYPAMMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQSMS-----GTHESNTMAMLARDGAEAAKWGG
1V74 Chain:B ((1-87))
-----MNKMAMIDLAKLFLASKITAIEFSERICVERRRLYGV---------KDLSPNILNCGEELFMAAERFEPDADRANYEIDDNGLKVEVRSILEKFKL
General information:
TITO was launched using:
RESULT:
Template:
1V74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14997 for 559 contacts (-26.8/contact) +
2D Compatibility (PS) -9520 + (NN) -5368 + (LL) 968
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -31967.0 ( -57.19 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_1V74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V74-query.scw
PDB file :
Tito_Scwrl_1V74.pdb
: