Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFA-RVLGDPALPHLFFVEGGALAVENALKAAFDWKS-RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV----AFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA----EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSL-PTTADR-DELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
4JEZ Chain:A ((56-404)) | ----------------------------------------------------GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSRVFTNEPALRLGRKLIDATFAERVL---------FMNSGTEANETAFKLARHYACVRHS-------PFKTKIIAFHNAFHGRSLFTVSV-GGQPKYSDGFGPKPADIIHVPF---------------NDLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLT---TQEIA-SAF------GSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQA-IDEQFDIFS----DIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JEZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172348 for 2872 contacts (-60.0/contact) +
2D Compatibility (PS) -36042 + (NN) -17569 + (LL) 7876
1D Compatibility (HY) -20800 + (ID) 6100
Total energy: -244983.0 ( -85.30 by residue)
QMean score : 0.411
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