Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPIGHPAA--IALADDAPIITPINSEFGKANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRY---DYVTTKPLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGD-FVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
| 1GQW Chain:B ((3-278)) | --ERLSITPLGPYIGAQISGAD--RPLSDNQFEQLYHAVLRHQVVFLRDQ-AITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKY-----EHQRWREAVAKNPPLL--HPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKP-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91172 for 2149 contacts (-42.4/contact) +
2D Compatibility (PS) -28981 + (NN) -13580 + (LL) 1920
1D Compatibility (HY) -13200 + (ID) 5200
Total energy: -150213.0 ( -69.90 by residue)
QMean score : 0.461
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