Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAP---VSVSATTTDGLGLTGRGEGLAAIATALVVSLR
3IEW Chain:B ((25-178))
-----RIGQGYDVHQLVPGRPLIIGGVTIPYERGLL---DADVLLHAITDALFGAAALGDIGRHFS-----FKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV---
General information:
TITO was launched using:
RESULT:
Template:
3IEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136178 for 1195 contacts (-114.0/contact) +
2D Compatibility (PS) -15852 + (NN) -11862 + (LL) 376
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -174766.0 ( -146.25 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3IEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEW-query.scw
PDB file :
Tito_Scwrl_3IEW.pdb
: