Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG
3TYU Chain:A ((19-278))------QVMGILNVTPDS------HNNLDQALQHAQRMLSAGATLIDIGGESTRPGAAEVSEQEELDRVVPVVEALAQRFDVWLSVDTSKAAVITESAHAGAHLINDIRSLQ-EPGALEAAAKTGLPVCLMHMQG----MQHSPY-YDDLMTDINRFFQHHIERCVAAGIAKNKLLLDPGFGFGKNLAHNYQLLAHLSELHHFELPLLVGMSRKSMVGQLLN------VPPQQRVIGSVACAVIAAMQGAQIIRVHDVKETVEAMCIVEATRSA-------


General information:
TITO was launched using:
RESULT:

Template: 3TYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121142 for 2056 contacts (-58.9/contact) +
2D Compatibility (PS) -27767 + (NN) -20782 + (LL) 656
1D Compatibility (HY) -20400 + (ID) 4950
Total energy: -194385.0 ( -94.55 by residue)
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_3TYU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TYU-query.scw
PDB file : Tito_Scwrl_3TYU.pdb: