Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGAN-AATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARLADGVVV-GSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR
1FUY Chain:A ((1-253))
MERYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLALIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAEN---LHHLIE---KLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIEK---NLASPKQMLAELRSFVSAMKAAS
General information:
TITO was launched using:
RESULT:
Template:
1FUY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146289 for 2112 contacts (-69.3/contact) +
2D Compatibility (PS) -28308 + (NN) -21648 + (LL) 988
1D Compatibility (HY) -16400 + (ID) 4800
Total energy: -216457.0 ( -102.49 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1FUY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FUY-query.scw
PDB file :
Tito_Scwrl_1FUY.pdb
: