Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPEPLVRDDLAAGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG----- |
| 3ISP Chain:A ((5-296)) | ----QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVREKP-CRATTAGIPLLRLAAQTALLESEALAEMGASLKRTRITIAVNADSMATWFSAVFDGLGDVLLDVRIE--DQDHSARLLREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLV-RKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCD--IHLDVPLYWQCWKLDSPIIARITDTVRAAASGLYRGQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101457 for 2258 contacts (-44.9/contact) +
2D Compatibility (PS) -30402 + (NN) -5141 + (LL) 660
1D Compatibility (HY) -6400 + (ID) 3300
Total energy: -146040.0 ( -64.68 by residue)
QMean score : 0.343
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