Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKYIALPAVSLLALALAACSTPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAYLTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSR-GISPERVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAKPVAPRSSVSG |
3TD3 Chain:D ((16-120)) | -----------------------------------------------------------------------------------------------------------------------------------------------VFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATIT-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23461 for 757 contacts (-31.0/contact) +
2D Compatibility (PS) -11929 + (NN) -9821 + (LL) 11372
1D Compatibility (HY) -4400 + (ID) 2200
Total energy: -40439.0 ( -53.42 by residue)
QMean score : 0.617
|
|
|