Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTL--------EGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVT--------RSARSDMLDVANLRPLLKDKDVLALQ---RIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLS-PELDIEGLSVDQVLQQLLDQVPAPRV |
1HQC Chain:A ((5-318)) | -----ALRPKTLDEYIGQERLKQKLRVYLEAAKARKE---------------PLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGD-----------ILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRP--GLITAPLL----SRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDEL--GLEKRDREILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGY-PPPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95000 for 2335 contacts (-40.7/contact) +
2D Compatibility (PS) -31071 + (NN) -11611 + (LL) 3620
1D Compatibility (HY) -1200 + (ID) 2700
Total energy: -137962.0 ( -59.08 by residue)
QMean score : 0.335
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