Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATLFDPIVLGDLELPNRIVMAPLTRCRADEGRVPNALMAEYYAQRADAG-LILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRISDPLYL-NGELPVAPSAIAAEGHVSLVRPKRP---YVTPRALDTEEIADIVEAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFSHVARELGK-----------------RGIAFICAREAQADDSIGVALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGG-TEGYLDYPTLA |
| 3HGS Chain:B ((18-390)) | ---LFSPYKMGKFNLSHRVVLAPMTRCRA-LNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQP-------SEEEEA--RLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161670 for 2918 contacts (-55.4/contact) +
2D Compatibility (PS) -36540 + (NN) -18987 + (LL) 988
1D Compatibility (HY) -26800 + (ID) 7450
Total energy: -250459.0 ( -85.83 by residue)
QMean score : 0.635
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