Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLSAFFEASFSAELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWADFDAELAAISLSALLDGLWLESGLNPATFTPRQGVQICEAWVDGLEAGAHRRFRRAMEAC
3LWJ Chain:A ((9-193))
----------QNKERRQKILTCSLDLFIEKGYYNTSIRDIIALSEVGTGTFYNYFVDKEDILKNLLEDFAKQIISSISEYYLV-EKDLYERFIETKRLTMEVFAQNETLSEIYSRV---AGSSAPIDQCLKQFEDRLLEFYSRNIEYGIKKGVFKNVPVSPIAHSILAIEKFSLYKWVVLKA-ITKEEMIEMVLSFHKTL---------------
General information:
TITO was launched using:
RESULT:
Template:
3LWJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107877 for 1323 contacts (-81.5/contact) +
2D Compatibility (PS) -20855 + (NN) -15973 + (LL) 2800
1D Compatibility (HY) -8800 + (ID) 1100
Total energy: -151805.0 ( -114.74 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3LWJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LWJ-query.scw
PDB file :
Tito_Scwrl_3LWJ.pdb
: