Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTLHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKALQGHEVTPVVLPDGEAYKQWETLQLIFDVLLKERHDRKTTLIALGGGVIGDMAGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHMDAL-LALEPTVVTEAIERSCAAKARVVGADERESGVRATLNLGHTFGHAIETQQGYGVWLHGEAVGAGTVMALEMSHRLGWLSAAERDRGIRLLRRAGLPVVPPAEMTAEDFMEHMAVDKKVLDGRLRLVLLQGLGNAVVTGDFPREILDATLRTDYRALADQLGDE |
| 1XAH Chain:A ((2-351)) | --KLQTTYPSNNYPIYVEHGAIKYIGTYLNQ--FDQSFLLIDEYVNQYFANKFD------NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILA-HDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYYH---KIPHGHAVMVGIIYQFIVANALFD-SKHDISHYIQYLIQLGYPLD-----------------------GVQMVLMRQFGDIVVQ-HVDQLTLQHACE-QLKT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220920 for 2714 contacts (-81.4/contact) +
2D Compatibility (PS) -34254 + (NN) -7533 + (LL) 3004
1D Compatibility (HY) -25200 + (ID) 5700
Total energy: -290603.0 ( -107.08 by residue)
QMean score : 0.388
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