Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPPVVIYTTAWCPYCIRAKQ-LLQRKGVDFQEIACD------GKPELRAELARKAGSTTVPQIWIGETHVGGCDDLHALERAGKLDALLSA
3C1R Chain:A ((25-113))
-NEIFVASKTYCPYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGKHIGGNDDLQELRETGELEELLE-
General information:
TITO was launched using:
RESULT:
Template:
3C1R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52403 for 552 contacts (-94.9/contact) +
2D Compatibility (PS) -9415 + (NN) -6809 + (LL) 352
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -77575.0 ( -140.53 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_3C1R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C1R-query.scw
PDB file :
Tito_Scwrl_3C1R.pdb
: