Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRSLLFALLATLLLVGGARAETDPDYSMVLLTE-NFPPYNMAINGKNFAQEDNIDGIAVDIVREMFKRAGIKYSLTLRFPWDRIYKLALEKPGYGVF-VTARLAEREDKFKWVGPIGPDDWVLLAKGDSPITLGSLDEAK--KYRIGAYKGDAIAEFLGKNGF-EADLAL-RDQENAQKLVKGQIDLWASGDPAGRYLAKQEGVTGLKTVLRFNSDQLYLALNRETPDEVVQKLQAALDGMRKEGFVEDILNSYL |
| 3KBR Chain:A ((9-236)) | --------------------DRILESGVLRVATTGDYKPFSYRT------EEGGYAGFDVDMAQRLAESLGAKLVVVP-TSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQPFDFAEKAYLLPRD--EAFKRYVDQWLHIAEQSGLLRQRMEHWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83899 for 1737 contacts (-48.3/contact) +
2D Compatibility (PS) -23807 + (NN) -12524 + (LL) 2216
1D Compatibility (HY) -800 + (ID) 1500
Total energy: -120314.0 ( -69.27 by residue)
QMean score : 0.532
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