Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNALVRLTQVGVSFNG-QAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVW-----------RRPRLTIGYMPQKLHVDATLPLSVLRFLRLV---PGVKREQALAALREVGAAHVLERPLQSISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGKLRDRYGCGVLMVSHDLHLVMSATDQVVCLNR-HVCCSGHPEQVSGDPAFVELFGQDARSLAIYHHHHDHAHDLHGEVVKAGPGALPP-----GTRFTPVHKHGPDCNHG--------------------------------------------------------
1Z47 Chain:A ((11-355))-GSMTIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR


General information:
TITO was launched using:
RESULT:

Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181282 for 2010 contacts (-90.2/contact) +
2D Compatibility (PS) -29449 + (NN) -17619 + (LL) 208
1D Compatibility (HY) -9600 + (ID) 3350
Total energy: -241092.0 ( -119.95 by residue)
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_1Z47.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z47-query.scw
PDB file : Tito_Scwrl_1Z47.pdb: