Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWTALPLLCAGAWLLSAGATAELTVNAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPE-KAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVT-EDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQ-NGLLYWIVKNSWGSNWGNNGYFLIERGK----NMCGLAACASYPIPQV |
| 1S4V Chain:A ((1-220)) | ----------------------------------------------------------------------------------------------------------------TVPASVDWRKKG-AVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFTG-SCGT---ELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116433 for 1859 contacts (-62.6/contact) +
2D Compatibility (PS) -23304 + (NN) -9097 + (LL) 8232
1D Compatibility (HY) -15200 + (ID) 5000
Total energy: -160802.0 ( -86.50 by residue)
QMean score : 0.358
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