Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKLLALLIMFYSGISVASAPTSWQFGFPAPATEIMEVIVKSHLFVMSVMVTIMLFVWALLAYVMFRFRKSKVTNISKTHHSILLEIVWFVIPTII-VGILAFENAKLLKLQEKIPKADITLKVIGHQWYWSYRYPEYQGVSFDSYI-----KEKDDFVKGDLK-------------LFSVDNNVVLPVNTNVRLQVTAGDVIHSWGVPAFGIKIDAIPGRLNEAWFNVKKPGVYYGQCYELCGQGHGFMPIVIEAVSKEDFNKWIENKKLVS
1M56 Chain:B ((5-258))--------------LEIIGRPQPGGTGFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNKVPARFTHNSPLEIAWTIVPIVILVAIGAFSLPVLFNQQE-IPEADVTVKVTGYQWYWGYEYPDEE-ISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQVTGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVSEEAYAAWLEQARGGT


General information:
TITO was launched using:
RESULT:

Template: 1M56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143839 for 1587 contacts (-90.6/contact) +
2D Compatibility (PS) -25686 + (NN) -15702 + (LL) 1640
1D Compatibility (HY) -21600 + (ID) 4700
Total energy: -209887.0 ( -132.25 by residue)
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_1M56.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M56-query.scw
PDB file : Tito_Scwrl_1M56.pdb: