Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MKEQDKIFTNLSGKETPLLKGAKKRG------SWQKT-------------------------------KELLDLGSEKII----DEVRKSGLRGR-----GGAGFSTGLKWSFMPKNP------SKEQPTYLVVNADESEPG-------TCKDRD------ILRYEPHKLLEGV-LLASRAISAS--VAYIYIRGEFYNEYLVLKQALEEA----YKEGLIG-KNACKSSYDLNVF----IHRGAGAYICGEET----AQLES--IEGKKGFP-RMKPPFPAGVGLFGCPTTINNVETIAMVPDILYRGGEWFASLGKPNNTGTKIFCVSGHVNNPCNVE---------EELGIPLRELIEEYAGGVR---------GGW-----DNLLAVIPGGSSVSLIPKSICDIIKMDFDSLRAAQSGLGTAAVIVMDKSTDIIAAIERLSHFY--MHESCGQCTPCREGTGWMW----------RIMKRMVTGNIKHGEIDKLLDLTTQ------IEGNTICALGDAAAWPIQGLIR--HFRHVIEERAITKLSVY--------------------------- |
| 5CD6 Chain:A ((2-580)) | QTTGVVCEEFDQIQLTHVLTPTGPLPTALDPNGVYPYMSYSETSNRPVPKRYRMISLENEKVKAIICPDLCGKVISLTHKESGKEVLYRPDVIKYTRILPRFYFVAGGIEVSFPISHSPTQNEPVLYQIDHTGDRTYVTCGERESHYGMQWSVEYSLGDKDECLTQRVVYYNPGKQAYPWMSWSNAALPCAPDTQYDFPNGTVLSHASTLDTIDWKTEGTHHERDIKEMTGYFWKTKDVNAFGAYTPSLGSGLYHIADESSTPGIKLWSYGVAGDKEWSMLSTPDRQPYVEIQGGPIS-DQSIKLELRPGEKKNHVEYWIPTDHPLD----IYSLKVPALRLRPIDRIPLFDWARKNESSIWIALADAYKNKSTLPAAPYPEDGQWAPSGMEDLDDAFRWAIQIS--PRPERDYWQFHYGTWLAGRERVEEAIEQLSIPDIDLAKALLARLYVRRQAWEKARDTYAAIPETSWLNLHPQLVIERDKVLKKF--GTEALPEREKWLDKINASSDEWVVERKVQLLIDKKQYQEAKDLLLSTHFQKVHQTYTRTGLWEQINEGLGLSPQPVPEQLGEDRLARFEYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25638 for 2730 contacts (9.4/contact) +
2D Compatibility (PS) -42153 + (NN) 13434 + (LL) 824
1D Compatibility (HY) 20800 + (ID) 1100
Total energy: 17443.0 ( 6.39 by residue)
QMean score : 0.058
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